Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
EFNB1P98172 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.99□□□□□ -0.33
EFNB1P98172 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.99□□□□□ -0.33
EFNB1P98172 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.99□□□□□ -0.33
EFNB1P98172 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
EFNB1P98172 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNB1P98172 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 AP000437.1-201ENST00000624057 2085 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 MIR1233-2-201ENST00000408138 82 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 MIR1233-1-201ENST00000408722 82 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.98□□□□□ -0.33
EFNB1P98172 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 INE1-201ENST00000456273 945 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.98□□□□□ -0.33
EFNB1P98172 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 AC027601.3-201ENST00000622907 509 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 AC132938.4-201ENST00000623835 848 ntBASIC12.98□□□□□ -0.33
EFNB1P98172 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB1P98172 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
EFNB1P98172 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB1P98172 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 AC125807.2-201ENST00000513358 3514 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 AL445250.1-201ENST00000641671 2259 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
EFNB1P98172 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
EFNB1P98172 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB1P98172 OR2I1P-209ENST00000641730 5365 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB1P98172 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 AC087499.6-201ENST00000411576 835 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 BAATP1-201ENST00000412284 1225 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 METTL21AP1-201ENST00000438852 635 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.97□□□□□ -0.33
EFNB1P98172 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
EFNB1P98172 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB1P98172 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB1P98172 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.97□□□□□ -0.33
EFNB1P98172 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.97□□□□□ -0.33
EFNB1P98172 AC005498.2-205ENST00000593218 784 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB1P98172 AC009118.2-201ENST00000613275 655 ntBASIC12.97□□□□□ -0.33
EFNB1P98172 WFDC1-204ENST00000613603 549 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms