Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.78□□□□□ -0.2
RAE1P78406 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RAE1P78406 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RAE1P78406 AL162426.1-201ENST00000624141 743 ntBASIC13.78□□□□□ -0.2
RAE1P78406 AC126755.1-201ENST00000525846 6405 ntBASIC13.78□□□□□ -0.2
RAE1P78406 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
RAE1P78406 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.77□□□□□ -0.2
RAE1P78406 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAE1P78406 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
RAE1P78406 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAE1P78406 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAE1P78406 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RAE1P78406 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.77□□□□□ -0.21
RAE1P78406 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.77□□□□□ -0.21
RAE1P78406 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAE1P78406 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 CSF2RBP1-201ENST00000447905 391 ntBASIC13.77□□□□□ -0.21
RAE1P78406 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.77□□□□□ -0.21
RAE1P78406 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.77□□□□□ -0.21
RAE1P78406 AC104989.1-201ENST00000519711 778 ntBASIC13.77□□□□□ -0.21
RAE1P78406 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.77□□□□□ -0.21
RAE1P78406 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.77□□□□□ -0.21
RAE1P78406 RBM8B-201ENST00000555532 525 ntBASIC13.77□□□□□ -0.21
RAE1P78406 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.77□□□□□ -0.21
RAE1P78406 MIR4741-201ENST00000579822 90 ntBASIC13.77□□□□□ -0.21
RAE1P78406 AC015818.8-201ENST00000587907 1519 ntBASIC13.77□□□□□ -0.21
RAE1P78406 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RAE1P78406 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RAE1P78406 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAE1P78406 AC105206.1-202ENST00000314927 2368 ntBASIC13.76□□□□□ -0.21
RAE1P78406 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 AC072061.1-201ENST00000569710 2234 ntBASIC13.76□□□□□ -0.21
RAE1P78406 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.76□□□□□ -0.21
RAE1P78406 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RAE1P78406 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 LINC02486-201ENST00000604157 3000 ntBASIC13.76□□□□□ -0.21
RAE1P78406 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.76□□□□□ -0.21
RAE1P78406 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms