Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC111170.3-201ENST00000624282 2464 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 ARSEP1-201ENST00000420443 635 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 DFFBP1-201ENST00000433250 979 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 PUDPP3-201ENST00000445368 636 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM11AP58511 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 FTLP10-202ENST00000505798 471 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM11AP58511 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC123567.1-201ENST00000548294 1261 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC027237.1-201ENST00000560942 655 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC009486.1-201ENST00000569860 813 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 KRT18P8-201ENST00000581937 1246 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC005252.2-201ENST00000624630 1141 ntBASIC13.48□□□□□ -0.25
SMIM11AP58511 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.48□□□□□ -0.25
SMIM11AP58511 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMIM11AP58511 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM11AP58511 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM11AP58511 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 USP17L6P-201ENST00000382470 1197 ntBASIC13.47□□□□□ -0.25
SMIM11AP58511 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.47□□□□□ -0.25
SMIM11AP58511 AC087499.6-201ENST00000411576 835 ntBASIC13.47□□□□□ -0.25
SMIM11AP58511 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 MRPS18AP1-201ENST00000414458 589 ntBASIC13.47□□□□□ -0.25
SMIM11AP58511 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM11AP58511 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.47□□□□□ -0.25
SMIM11AP58511 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 AC005586.2-201ENST00000563946 837 ntBASIC13.47□□□□□ -0.25
SMIM11AP58511 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM11AP58511 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.47□□□□□ -0.25
SMIM11AP58511 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM11AP58511 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SMIM11AP58511 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.47□□□□□ -0.25
SMIM11AP58511 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMIM11AP58511 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM11AP58511 PTPRVP-205ENST00000641549 5067 ntBASIC13.47□□□□□ -0.25
SMIM11AP58511 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM11AP58511 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms