Protein–RNA interactions for Protein: P54849

EMP1, Epithelial membrane protein 1, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1P54849 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 BX640514.1-201ENST00000583223 1918 ntBASIC11.01□□□□□ -0.65
EMP1P54849 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
EMP1P54849 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 BAATP1-201ENST00000412284 1225 ntBASIC11.01□□□□□ -0.65
EMP1P54849 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 KRT43P-201ENST00000434019 910 ntBASIC11.01□□□□□ -0.65
EMP1P54849 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.01□□□□□ -0.65
EMP1P54849 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.01□□□□□ -0.65
EMP1P54849 AC234783.1-201ENST00000441761 496 ntBASIC11.01□□□□□ -0.65
EMP1P54849 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.01□□□□□ -0.65
EMP1P54849 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 SLC25A47P1-201ENST00000531577 414 ntBASIC11.01□□□□□ -0.65
EMP1P54849 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 CLUHP6-201ENST00000580789 941 ntBASIC11.01□□□□□ -0.65
EMP1P54849 AC015936.2-201ENST00000593177 259 ntBASIC11.01□□□□□ -0.65
EMP1P54849 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.01□□□□□ -0.65
EMP1P54849 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.01□□□□□ -0.65
EMP1P54849 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.01□□□□□ -0.65
EMP1P54849 AC018665.1-201ENST00000622927 1362 ntBASIC11.01□□□□□ -0.65
EMP1P54849 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
EMP1P54849 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
EMP1P54849 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
EMP1P54849 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11□□□□□ -0.65
EMP1P54849 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
EMP1P54849 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11□□□□□ -0.65
EMP1P54849 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11□□□□□ -0.65
EMP1P54849 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11□□□□□ -0.65
EMP1P54849 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
EMP1P54849 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms