Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PDX1P52945 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 AC239868.1-201ENST00000369385 493 ntBASIC14.17□□□□□ -0.14
PDX1P52945 OR2K2-202ENST00000374428 1038 ntBASIC14.17□□□□□ -0.14
PDX1P52945 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 AL157407.1-201ENST00000435784 904 ntBASIC14.17□□□□□ -0.14
PDX1P52945 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 AL645933.1-201ENST00000440087 609 ntBASIC14.17□□□□□ -0.14
PDX1P52945 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.17□□□□□ -0.14
PDX1P52945 AC006122.1-201ENST00000493323 440 ntBASIC14.17□□□□□ -0.14
PDX1P52945 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PDX1P52945 NPM1P43-201ENST00000558669 786 ntBASIC14.17□□□□□ -0.14
PDX1P52945 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.17□□□□□ -0.14
PDX1P52945 AC009884.2-201ENST00000603110 324 ntBASIC14.17□□□□□ -0.14
PDX1P52945 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.17□□□□□ -0.14
PDX1P52945 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.17□□□□□ -0.14
PDX1P52945 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.17□□□□□ -0.14
PDX1P52945 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.17□□□□□ -0.14
PDX1P52945 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.17□□□□□ -0.14
PDX1P52945 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 KRT8P21-201ENST00000430398 1491 ntBASIC14.17□□□□□ -0.14
PDX1P52945 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PDX1P52945 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 MYO15B-237ENST00000642007 4893 ntBASIC14.16□□□□□ -0.14
PDX1P52945 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.16□□□□□ -0.14
PDX1P52945 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.16□□□□□ -0.14
PDX1P52945 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDX1P52945 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.16□□□□□ -0.14
PDX1P52945 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.16□□□□□ -0.14
PDX1P52945 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.16□□□□□ -0.14
PDX1P52945 AC098935.1-201ENST00000446057 611 ntBASIC14.16□□□□□ -0.14
PDX1P52945 NOC2LP1-201ENST00000450578 752 ntBASIC14.16□□□□□ -0.14
PDX1P52945 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.16□□□□□ -0.14
PDX1P52945 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.16□□□□□ -0.14
PDX1P52945 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.16□□□□□ -0.14
PDX1P52945 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.16□□□□□ -0.14
PDX1P52945 AC011491.1-203ENST00000637688 543 ntBASIC14.16□□□□□ -0.14
PDX1P52945 AC018529.2-202ENST00000611482 3087 ntBASIC14.16□□□□□ -0.14
PDX1P52945 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDX1P52945 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.16□□□□□ -0.14
PDX1P52945 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDX1P52945 AC023908.3-201ENST00000564211 3047 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms