Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HCFC1P51610 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HCFC1P51610 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 AC232323.1-201ENST00000540724 2099 ntBASIC12.58□□□□□ -0.4
HCFC1P51610 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 Z69890.1-201ENST00000382990 339 ntBASIC12.58□□□□□ -0.4
HCFC1P51610 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 AP003398.1-201ENST00000531124 318 ntBASIC12.58□□□□□ -0.4
HCFC1P51610 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 LINC00431-202ENST00000636375 159 ntBASIC12.58□□□□□ -0.4
HCFC1P51610 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HCFC1P51610 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HCFC1P51610 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
HCFC1P51610 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.57□□□□□ -0.4
HCFC1P51610 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.57□□□□□ -0.4
HCFC1P51610 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.57□□□□□ -0.4
HCFC1P51610 DUX4L50-201ENST00000455245 715 ntBASIC12.57□□□□□ -0.4
HCFC1P51610 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.57□□□□□ -0.4
HCFC1P51610 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.57□□□□□ -0.4
HCFC1P51610 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.57□□□□□ -0.4
HCFC1P51610 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 AC090386.2-201ENST00000623010 1039 ntBASIC12.57□□□□□ -0.4
HCFC1P51610 AC073592.2-201ENST00000623062 780 ntBASIC12.57□□□□□ -0.4
HCFC1P51610 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 TEKT4P2-202ENST00000559466 1312 ntBASIC12.57□□□□□ -0.4
HCFC1P51610 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 AL136172.1-201ENST00000598590 1394 ntBASIC12.57□□□□□ -0.4
HCFC1P51610 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HCFC1P51610 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.57□□□□□ -0.4
HCFC1P51610 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 RN7SL396P-201ENST00000471086 295 ntBASIC12.57□□□□□ -0.4
HCFC1P51610 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.57□□□□□ -0.4
HCFC1P51610 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
HCFC1P51610 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.57□□□□□ -0.4
HCFC1P51610 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HCFC1P51610 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms