Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 AC104506.1-201ENST00000609247 429 ntBASIC15.96■□□□□ 0.15
CPT1AP50416 MIR6074-201ENST00000612054 107 ntBASIC15.96■□□□□ 0.15
CPT1AP50416 LINC00431-202ENST00000636375 159 ntBASIC15.96■□□□□ 0.15
CPT1AP50416 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CPT1AP50416 AC132872.4-202ENST00000622924 2756 ntBASIC15.96■□□□□ 0.15
CPT1AP50416 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.96■□□□□ 0.14
CPT1AP50416 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CPT1AP50416 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPT1AP50416 AC215219.1-201ENST00000400706 1817 ntBASIC15.96■□□□□ 0.14
CPT1AP50416 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPT1AP50416 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.14
CPT1AP50416 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.96■□□□□ 0.14
CPT1AP50416 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.96■□□□□ 0.14
CPT1AP50416 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
CPT1AP50416 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.95■□□□□ 0.14
CPT1AP50416 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 PPP1R2P4-201ENST00000424051 595 ntBASIC15.95■□□□□ 0.14
CPT1AP50416 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.95■□□□□ 0.14
CPT1AP50416 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.95■□□□□ 0.14
CPT1AP50416 LINC00634-202ENST00000505157 222 ntBASIC15.95■□□□□ 0.14
CPT1AP50416 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CPT1AP50416 AL021707.6-201ENST00000609212 491 ntBASIC15.95■□□□□ 0.14
CPT1AP50416 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.95■□□□□ 0.14
CPT1AP50416 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPT1AP50416 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.95■□□□□ 0.14
CPT1AP50416 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPT1AP50416 AC023157.3-201ENST00000619086 2088 ntBASIC15.95■□□□□ 0.14
CPT1AP50416 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.95■□□□□ 0.14
CPT1AP50416 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 BX679664.3-201ENST00000414070 555 ntBASIC15.94■□□□□ 0.14
CPT1AP50416 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 KRT18P66-201ENST00000452970 1269 ntBASIC15.94■□□□□ 0.14
CPT1AP50416 AC113935.1-201ENST00000471722 555 ntBASIC15.94■□□□□ 0.14
CPT1AP50416 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.94■□□□□ 0.14
CPT1AP50416 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.94■□□□□ 0.14
CPT1AP50416 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 AC145285.5-201ENST00000562217 361 ntBASIC15.94■□□□□ 0.14
CPT1AP50416 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms