Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MRE11P49959 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.1■□□□□ 0.33
MRE11P49959 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.1■□□□□ 0.33
MRE11P49959 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.1■□□□□ 0.33
MRE11P49959 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.1■□□□□ 0.33
MRE11P49959 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.1■□□□□ 0.33
MRE11P49959 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MRE11P49959 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
MRE11P49959 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MRE11P49959 AKAP8P1-201ENST00000434743 1349 ntBASIC17.1■□□□□ 0.33
MRE11P49959 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.1■□□□□ 0.33
MRE11P49959 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
MRE11P49959 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MRE11P49959 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MRE11P49959 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC17.1■□□□□ 0.33
MRE11P49959 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.1■□□□□ 0.33
MRE11P49959 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MRE11P49959 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRE11P49959 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC17.09■□□□□ 0.33
MRE11P49959 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.09■□□□□ 0.33
MRE11P49959 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MRE11P49959 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MRE11P49959 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.09■□□□□ 0.33
MRE11P49959 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.09■□□□□ 0.33
MRE11P49959 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.09■□□□□ 0.33
MRE11P49959 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.09■□□□□ 0.33
MRE11P49959 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.09■□□□□ 0.33
MRE11P49959 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 RARRES2P8-201ENST00000566335 367 ntBASIC17.09■□□□□ 0.33
MRE11P49959 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.09■□□□□ 0.33
MRE11P49959 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 CLK3P2-201ENST00000427566 1453 ntBASIC17.09■□□□□ 0.33
MRE11P49959 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MRE11P49959 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.09■□□□□ 0.33
MRE11P49959 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.09■□□□□ 0.33
MRE11P49959 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRE11P49959 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MRE11P49959 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRE11P49959 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC17.08■□□□□ 0.33
MRE11P49959 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRE11P49959 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRE11P49959 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
MRE11P49959 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
MRE11P49959 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
MRE11P49959 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.08■□□□□ 0.33
MRE11P49959 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
MRE11P49959 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MRE11P49959 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MRE11P49959 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MRE11P49959 AC140658.5-201ENST00000438532 169 ntBASIC17.08■□□□□ 0.32
MRE11P49959 BNIP3P42-201ENST00000454982 569 ntBASIC17.08■□□□□ 0.32
MRE11P49959 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.08■□□□□ 0.32
MRE11P49959 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.08■□□□□ 0.32
MRE11P49959 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.08■□□□□ 0.32
MRE11P49959 AC015910.1-201ENST00000579400 975 ntBASIC17.08■□□□□ 0.32
MRE11P49959 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.08■□□□□ 0.32
MRE11P49959 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.08■□□□□ 0.32
MRE11P49959 BNIP3P29-201ENST00000598302 571 ntBASIC17.08■□□□□ 0.32
MRE11P49959 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.08■□□□□ 0.32
MRE11P49959 AC011447.5-201ENST00000616168 564 ntBASIC17.08■□□□□ 0.32
MRE11P49959 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.08■□□□□ 0.32
MRE11P49959 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MRE11P49959 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms