Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 EIF3FP3-201ENST00000434851 1086 ntBASIC12.91□□□□□ -0.34
SOX2P48431 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 DOC2GP-202ENST00000514950 1163 ntBASIC12.91□□□□□ -0.34
SOX2P48431 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 AC138761.1-201ENST00000584393 385 ntBASIC12.91□□□□□ -0.34
SOX2P48431 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 BRI3BPP1-201ENST00000594224 787 ntBASIC12.91□□□□□ -0.34
SOX2P48431 MIR6074-201ENST00000612054 107 ntBASIC12.91□□□□□ -0.34
SOX2P48431 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SOX2P48431 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SOX2P48431 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 AGAP10P-201ENST00000454844 2418 ntBASIC12.91□□□□□ -0.34
SOX2P48431 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SOX2P48431 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.91□□□□□ -0.34
SOX2P48431 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SOX2P48431 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 MIR193BHG-211ENST00000641433 5365 ntBASIC12.9□□□□□ -0.34
SOX2P48431 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SOX2P48431 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 SPDYE19P-201ENST00000338590 713 ntBASIC12.9□□□□□ -0.34
SOX2P48431 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.9□□□□□ -0.34
SOX2P48431 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 AC114812.1-204ENST00000449669 728 ntBASIC12.9□□□□□ -0.34
SOX2P48431 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.9□□□□□ -0.34
SOX2P48431 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.9□□□□□ -0.34
SOX2P48431 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 AC079781.4-201ENST00000641908 219 ntBASIC12.9□□□□□ -0.34
SOX2P48431 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SOX2P48431 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SOX2P48431 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SOX2P48431 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.9□□□□□ -0.34
SOX2P48431 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.9□□□□□ -0.35
SOX2P48431 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.9□□□□□ -0.35
SOX2P48431 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SOX2P48431 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms