Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.41□□□□□ -0.26
RFC3P40938 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.41□□□□□ -0.26
RFC3P40938 FGFR3P5-201ENST00000564496 886 ntBASIC13.41□□□□□ -0.26
RFC3P40938 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.41□□□□□ -0.26
RFC3P40938 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.41□□□□□ -0.26
RFC3P40938 AL136295.7-201ENST00000619226 1200 ntBASIC13.41□□□□□ -0.26
RFC3P40938 Z98259.2-201ENST00000641583 609 ntBASIC13.41□□□□□ -0.26
RFC3P40938 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RFC3P40938 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RFC3P40938 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.41□□□□□ -0.26
RFC3P40938 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
RFC3P40938 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFC3P40938 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RFC3P40938 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RFC3P40938 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 AC018529.2-202ENST00000611482 3087 ntBASIC13.4□□□□□ -0.26
RFC3P40938 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RFC3P40938 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RFC3P40938 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 VDAC1P1-201ENST00000439229 848 ntBASIC13.4□□□□□ -0.26
RFC3P40938 AC012441.2-201ENST00000444843 739 ntBASIC13.4□□□□□ -0.26
RFC3P40938 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.4□□□□□ -0.26
RFC3P40938 AC125604.1-201ENST00000496255 707 ntBASIC13.4□□□□□ -0.26
RFC3P40938 RCC2P8-201ENST00000502779 1035 ntBASIC13.4□□□□□ -0.26
RFC3P40938 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 MARK2P5-201ENST00000507649 634 ntBASIC13.4□□□□□ -0.26
RFC3P40938 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.4□□□□□ -0.26
RFC3P40938 AC009884.2-201ENST00000603110 324 ntBASIC13.4□□□□□ -0.26
RFC3P40938 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.4□□□□□ -0.26
RFC3P40938 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.4□□□□□ -0.26
RFC3P40938 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.4□□□□□ -0.26
RFC3P40938 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RFC3P40938 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.4□□□□□ -0.26
RFC3P40938 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 AL157791.1-201ENST00000553667 1699 ntBASIC13.4□□□□□ -0.26
RFC3P40938 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFC3P40938 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.4□□□□□ -0.27
RFC3P40938 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 AJ011931.1-201ENST00000618749 2492 ntBASIC13.39□□□□□ -0.27
RFC3P40938 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms