Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 KLK8-203ENST00000347619 555 ntTSL 2 BASIC18.46■□□□□ 0.55
RXRBP28702 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RXRBP28702 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC18.46■□□□□ 0.55
RXRBP28702 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 FTLP3-201ENST00000427242 528 ntBASIC18.46■□□□□ 0.55
RXRBP28702 HNRNPA1P3-201ENST00000440968 551 ntBASIC18.46■□□□□ 0.55
RXRBP28702 AC012513.2-201ENST00000441511 1137 ntBASIC18.46■□□□□ 0.55
RXRBP28702 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC18.46■□□□□ 0.55
RXRBP28702 SRPK2P-201ENST00000523408 1100 ntBASIC18.46■□□□□ 0.55
RXRBP28702 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC18.46■□□□□ 0.55
RXRBP28702 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 AL109954.3-201ENST00000615088 558 ntBASIC18.46■□□□□ 0.55
RXRBP28702 AC127002.1-201ENST00000619123 455 ntBASIC18.46■□□□□ 0.55
RXRBP28702 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.46■□□□□ 0.55
RXRBP28702 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC18.46■□□□□ 0.55
RXRBP28702 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RXRBP28702 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC18.46■□□□□ 0.54
RXRBP28702 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.45■□□□□ 0.54
RXRBP28702 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 AC103702.1-201ENST00000548801 2630 ntBASIC18.45■□□□□ 0.54
RXRBP28702 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 IL6RP1-201ENST00000417848 1273 ntBASIC18.45■□□□□ 0.54
RXRBP28702 PLAC9P1-203ENST00000440031 223 ntBASIC18.45■□□□□ 0.54
RXRBP28702 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC18.45■□□□□ 0.54
RXRBP28702 AC103724.2-201ENST00000520355 476 ntBASIC18.45■□□□□ 0.54
RXRBP28702 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC18.45■□□□□ 0.54
RXRBP28702 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC18.45■□□□□ 0.54
RXRBP28702 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.45■□□□□ 0.54
RXRBP28702 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC18.45■□□□□ 0.54
RXRBP28702 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC18.45■□□□□ 0.54
RXRBP28702 AC136475.7-201ENST00000602949 592 ntBASIC18.45■□□□□ 0.54
RXRBP28702 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC18.45■□□□□ 0.54
RXRBP28702 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.45■□□□□ 0.54
RXRBP28702 KRT8P38-201ENST00000441370 1430 ntBASIC18.45■□□□□ 0.54
RXRBP28702 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.45■□□□□ 0.54
RXRBP28702 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RXRBP28702 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RXRBP28702 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
RXRBP28702 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 DLX4-206ENST00000611342 1662 ntBASIC18.44■□□□□ 0.54
RXRBP28702 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.44■□□□□ 0.54
RXRBP28702 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RXRBP28702 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RXRBP28702 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RXRBP28702 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.44■□□□□ 0.54
RXRBP28702 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.44■□□□□ 0.54
RXRBP28702 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RXRBP28702 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RXRBP28702 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 AC138392.1-201ENST00000427577 921 ntBASIC18.44■□□□□ 0.54
RXRBP28702 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.44■□□□□ 0.54
RXRBP28702 AC012066.1-201ENST00000439252 694 ntBASIC18.44■□□□□ 0.54
RXRBP28702 RN7SL148P-201ENST00000467120 279 ntBASIC18.44■□□□□ 0.54
RXRBP28702 AC104212.2-201ENST00000478813 628 ntBASIC18.44■□□□□ 0.54
RXRBP28702 OR4A49P-201ENST00000527050 632 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms