Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AC100850.1-201ENST00000506768 649 ntBASIC13.09□□□□□ -0.31
HLA-DOBP13765 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 MIR4259-201ENST00000584466 101 ntBASIC13.09□□□□□ -0.31
HLA-DOBP13765 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HLA-DOBP13765 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
HLA-DOBP13765 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.08□□□□□ -0.31
HLA-DOBP13765 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HLA-DOBP13765 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
HLA-DOBP13765 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
HLA-DOBP13765 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HLA-DOBP13765 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HLA-DOBP13765 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 MST1P2-201ENST00000457982 2291 ntBASIC13.08□□□□□ -0.32
HLA-DOBP13765 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 GPR53P-205ENST00000457298 1084 ntBASIC13.08□□□□□ -0.32
HLA-DOBP13765 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 MIR4741-201ENST00000579822 90 ntBASIC13.08□□□□□ -0.32
HLA-DOBP13765 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 AC008825.2-201ENST00000603374 718 ntBASIC13.08□□□□□ -0.32
HLA-DOBP13765 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
HLA-DOBP13765 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DOBP13765 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AC009093.10-201ENST00000641956 1442 ntBASIC13.07□□□□□ -0.32
HLA-DOBP13765 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms