Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL4P13236 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL4P13236 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL4P13236 MYADML-201ENST00000474610 2147 ntBASIC13.62□□□□□ -0.23
CCL4P13236 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCL4P13236 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL4P13236 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL4P13236 AC007952.4-201ENST00000573866 637 ntBASIC13.62□□□□□ -0.23
CCL4P13236 MIR2392-201ENST00000584881 84 ntBASIC13.62□□□□□ -0.23
CCL4P13236 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL4P13236 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL4P13236 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL4P13236 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
CCL4P13236 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 AC023157.3-201ENST00000619086 2088 ntBASIC13.61□□□□□ -0.23
CCL4P13236 BAK1P1-201ENST00000317045 636 ntBASIC13.61□□□□□ -0.23
CCL4P13236 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCL4P13236 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.61□□□□□ -0.23
CCL4P13236 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL4P13236 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.61□□□□□ -0.23
CCL4P13236 AL357563.1-201ENST00000404728 395 ntBASIC13.61□□□□□ -0.23
CCL4P13236 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 AL161932.2-201ENST00000435436 679 ntBASIC13.61□□□□□ -0.23
CCL4P13236 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 OR5BD1P-201ENST00000532527 817 ntBASIC13.61□□□□□ -0.23
CCL4P13236 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL4P13236 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL4P13236 MIR5196-201ENST00000578146 115 ntBASIC13.61□□□□□ -0.23
CCL4P13236 RN7SL665P-201ENST00000578793 300 ntBASIC13.61□□□□□ -0.23
CCL4P13236 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL4P13236 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL4P13236 SIGLEC22P-201ENST00000599104 714 ntBASIC13.61□□□□□ -0.23
CCL4P13236 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.61□□□□□ -0.23
CCL4P13236 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCL4P13236 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL4P13236 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CCL4P13236 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL4P13236 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms