Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ACE3P-201ENST00000423435 1973 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 FRMPD2B-201ENST00000431305 1347 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AC091046.1-201ENST00000331871 207 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 FXNP2-201ENST00000411625 547 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AC019193.1-201ENST00000506678 823 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 MIR4722-201ENST00000578292 60 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 MIR4706-201ENST00000582134 82 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 TMBIM7P-202ENST00000641474 1516 ntBASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40ALP0C0E4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 TBC1D3J-201ENST00000620719 1426 ntBASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 AC139749.1-202ENST00000617529 3139 ntBASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40ALP0C0E4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms