Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM1P09493 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM1P09493 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM1P09493 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM1P09493 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 HSPA8P5-201ENST00000456928 2069 ntBASIC16.15■□□□□ 0.18
TPM1P09493 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM1P09493 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM1P09493 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM1P09493 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.15■□□□□ 0.18
TPM1P09493 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 AC134915.1-201ENST00000426461 574 ntBASIC16.15■□□□□ 0.18
TPM1P09493 AC009477.1-201ENST00000452936 217 ntBASIC16.15■□□□□ 0.18
TPM1P09493 AP001582.1-201ENST00000525856 295 ntBASIC16.15■□□□□ 0.18
TPM1P09493 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM1P09493 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM1P09493 AC011498.7-201ENST00000624986 2027 ntBASIC16.15■□□□□ 0.18
TPM1P09493 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TPM1P09493 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM1P09493 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TPM1P09493 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM1P09493 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM1P09493 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TPM1P09493 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TPM1P09493 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.14■□□□□ 0.18
TPM1P09493 AC023794.5-201ENST00000564380 2157 ntBASIC16.14■□□□□ 0.17
TPM1P09493 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 INTS4P2-202ENST00000614726 2019 ntBASIC16.14■□□□□ 0.17
TPM1P09493 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TPM1P09493 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM1P09493 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 RNU1-114P-201ENST00000365297 166 ntBASIC16.14■□□□□ 0.17
TPM1P09493 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TPM1P09493 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM1P09493 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM1P09493 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM1P09493 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.14■□□□□ 0.17
TPM1P09493 TPRX2P-201ENST00000535362 881 ntBASIC16.14■□□□□ 0.17
TPM1P09493 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TPM1P09493 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM1P09493 AL390955.2-201ENST00000603032 514 ntBASIC16.14■□□□□ 0.17
TPM1P09493 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM1P09493 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 AC090643.2-201ENST00000623442 2029 ntBASIC16.14■□□□□ 0.17
TPM1P09493 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 AC020658.7-201ENST00000624274 2442 ntBASIC16.14■□□□□ 0.17
TPM1P09493 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TPM1P09493 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TPM1P09493 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM1P09493 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 AC073957.3-201ENST00000609998 6758 ntBASIC16.13■□□□□ 0.17
TPM1P09493 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms