Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC8.71□□□□□ -1.02
APOBP04114 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC8.71□□□□□ -1.02
APOBP04114 AC132825.4-202ENST00000578792 434 ntBASIC8.71□□□□□ -1.02
APOBP04114 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC8.71□□□□□ -1.02
APOBP04114 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC8.71□□□□□ -1.02
APOBP04114 AL591471.1-201ENST00000621855 229 ntBASIC8.71□□□□□ -1.02
APOBP04114 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC8.71□□□□□ -1.02
APOBP04114 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
APOBP04114 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC8.71□□□□□ -1.02
APOBP04114 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
APOBP04114 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.71□□□□□ -1.02
APOBP04114 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
APOBP04114 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 FES-203ENST00000394302 2133 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
APOBP04114 RPL18AP15-201ENST00000430258 517 ntBASIC8.7□□□□□ -1.02
APOBP04114 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC8.7□□□□□ -1.02
APOBP04114 OR4C14P-201ENST00000440929 923 ntBASIC8.7□□□□□ -1.02
APOBP04114 PPY-202ENST00000587006 431 ntTSL 3 BASIC8.7□□□□□ -1.02
APOBP04114 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC8.7□□□□□ -1.02
APOBP04114 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC8.7□□□□□ -1.02
APOBP04114 AL137028.2-201ENST00000614601 256 ntBASIC8.7□□□□□ -1.02
APOBP04114 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
APOBP04114 RBP4-203ENST00000371469 814 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 ACTBP14-201ENST00000411655 1089 ntBASIC8.7□□□□□ -1.02
APOBP04114 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC8.7□□□□□ -1.02
APOBP04114 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 SALL4P6-201ENST00000429385 1691 ntBASIC8.7□□□□□ -1.02
APOBP04114 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 GOLGA2P8-201ENST00000505201 779 ntBASIC8.7□□□□□ -1.02
APOBP04114 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 AC100858.1-201ENST00000514059 1228 ntBASIC8.7□□□□□ -1.02
APOBP04114 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 AC008620.2-201ENST00000510294 1569 ntBASIC8.7□□□□□ -1.02
APOBP04114 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 AC106785.2-201ENST00000564385 1319 ntBASIC8.7□□□□□ -1.02
APOBP04114 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
APOBP04114 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 MIR632-201ENST00000385193 94 ntBASIC8.7□□□□□ -1.02
APOBP04114 OR2W2P-201ENST00000406313 909 ntBASIC8.7□□□□□ -1.02
APOBP04114 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
APOBP04114 AL109954.1-202ENST00000564051 2148 ntBASIC8.7□□□□□ -1.02
APOBP04114 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC8.7□□□□□ -1.02
APOBP04114 GSN-215ENST00000545652 2428 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 PKD1P6-201ENST00000343738 4769 ntBASIC8.69□□□□□ -1.02
APOBP04114 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 PTN-202ENST00000393083 1599 ntTSL 5 BASIC8.69□□□□□ -1.02
APOBP04114 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC8.69□□□□□ -1.02
APOBP04114 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
APOBP04114 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms