Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TIMP1P01033 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 RPL13AP3-202ENST00000494676 1473 ntBASIC15.42■□□□□ 0.06
TIMP1P01033 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.42■□□□□ 0.06
TIMP1P01033 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.42■□□□□ 0.06
TIMP1P01033 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.42■□□□□ 0.06
TIMP1P01033 ABCD1P4-201ENST00000399687 604 ntBASIC15.42■□□□□ 0.06
TIMP1P01033 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.42■□□□□ 0.06
TIMP1P01033 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC15.42■□□□□ 0.06
TIMP1P01033 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.42■□□□□ 0.06
TIMP1P01033 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.42■□□□□ 0.06
TIMP1P01033 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.42■□□□□ 0.06
TIMP1P01033 AC104506.1-201ENST00000609247 429 ntBASIC15.42■□□□□ 0.06
TIMP1P01033 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.42■□□□□ 0.06
TIMP1P01033 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.42■□□□□ 0.06
TIMP1P01033 AC139713.2-207ENST00000641556 1292 ntBASIC15.42■□□□□ 0.06
TIMP1P01033 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.42■□□□□ 0.06
TIMP1P01033 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TIMP1P01033 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TIMP1P01033 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.42■□□□□ 0.06
TIMP1P01033 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TIMP1P01033 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 TBC1D27-202ENST00000424239 1573 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 KRT8P43-201ENST00000406052 1458 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 WASH7P-201ENST00000488147 1351 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TIMP1P01033 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TIMP1P01033 AC022080.1-201ENST00000366255 781 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.41■□□□□ 0.06
TIMP1P01033 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.41■□□□□ 0.06
TIMP1P01033 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 AC027612.2-202ENST00000445955 1199 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.41■□□□□ 0.06
TIMP1P01033 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.41■□□□□ 0.06
TIMP1P01033 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 AC132825.4-202ENST00000578792 434 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TIMP1P01033 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.41■□□□□ 0.06
TIMP1P01033 URAHP-205ENST00000610227 398 ntBASIC15.41■□□□□ 0.06
TIMP1P01033 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.41■□□□□ 0.06
TIMP1P01033 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TIMP1P01033 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TIMP1P01033 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TIMP1P01033 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TIMP1P01033 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TIMP1P01033 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TIMP1P01033 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 RPL3P2-204ENST00000413027 1203 ntBASIC15.4■□□□□ 0.06
TIMP1P01033 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 RPS18P9-201ENST00000482817 460 ntBASIC15.4■□□□□ 0.06
TIMP1P01033 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
TIMP1P01033 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC15.4■□□□□ 0.06
TIMP1P01033 AC078814.4-201ENST00000546650 327 ntBASIC15.4■□□□□ 0.06
TIMP1P01033 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms