Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ACKR1-201ENST00000368121 1240 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RFPL1O75677 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.66□□□□□ -0.06
RFPL1O75677 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 MIR1908-201ENST00000410394 80 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 RPL7P3-201ENST00000441388 714 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.66□□□□□ -0.06
RFPL1O75677 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.66□□□□□ -0.06
RFPL1O75677 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.66□□□□□ -0.06
RFPL1O75677 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 BX088702.1-201ENST00000610784 235 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 MIR6869-201ENST00000619434 62 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 CLUHP2-201ENST00000426660 1303 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.65□□□□□ -0.06
RFPL1O75677 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 AC020658.7-201ENST00000624274 2442 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.65□□□□□ -0.06
RFPL1O75677 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.65□□□□□ -0.06
RFPL1O75677 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.65□□□□□ -0.06
RFPL1O75677 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 CSF2RBP1-201ENST00000447905 391 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.65□□□□□ -0.06
RFPL1O75677 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.65□□□□□ -0.06
RFPL1O75677 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 MESTP3-201ENST00000503460 968 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.65□□□□□ -0.06
RFPL1O75677 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.65□□□□□ -0.06
RFPL1O75677 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.65□□□□□ -0.06
RFPL1O75677 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.65□□□□□ -0.06
RFPL1O75677 AC009486.1-201ENST00000569860 813 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.65□□□□□ -0.06
RFPL1O75677 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RFPL1O75677 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.65□□□□□ -0.06
RFPL1O75677 CLUHP6-201ENST00000580789 941 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 AC084346.2-201ENST00000607097 949 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFPL1O75677 GPR182-203ENST00000622922 591 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
RFPL1O75677 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFPL1O75677 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFPL1O75677 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFPL1O75677 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFPL1O75677 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.65□□□□□ -0.06
RFPL1O75677 TUBB8P4-201ENST00000511806 1324 ntBASIC14.65□□□□□ -0.06
RFPL1O75677 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.64□□□□□ -0.07
RFPL1O75677 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms