Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRIM3O75382 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 ACTBP11-201ENST00000436287 1126 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 HOMER2P2-201ENST00000451621 847 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 RPL13AP20-201ENST00000459725 609 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.69□□□□□ -0.22
TRIM3O75382 AC092658.1-201ENST00000505836 891 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM3O75382 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.69□□□□□ -0.22
TRIM3O75382 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 AP000593.2-201ENST00000542775 1433 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 AL023775.1-201ENST00000454907 1746 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRIM3O75382 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.69□□□□□ -0.22
TRIM3O75382 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.68□□□□□ -0.22
TRIM3O75382 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.68□□□□□ -0.22
TRIM3O75382 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.68□□□□□ -0.22
TRIM3O75382 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 FAM86HP-204ENST00000513466 959 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.68□□□□□ -0.22
TRIM3O75382 AP006547.1-201ENST00000563435 692 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.68□□□□□ -0.22
TRIM3O75382 MIR4741-201ENST00000579822 90 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 EEF1DP1-201ENST00000585891 896 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 AC138696.2-201ENST00000607376 223 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 ZACNP1-201ENST00000612259 710 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 MIR6799-201ENST00000620297 69 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRIM3O75382 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM3O75382 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRIM3O75382 MIR193BHG-211ENST00000641433 5365 ntBASIC13.68□□□□□ -0.22
TRIM3O75382 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRIM3O75382 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 AC023090.2-201ENST00000625182 2110 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms