Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AC007326.2-201ENST00000624224 7579 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AL136309.1-201ENST00000403917 691 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 HSFY4P-201ENST00000415994 1181 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 RFESDP1-201ENST00000422350 461 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AC026954.1-201ENST00000429771 1293 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 VN1R48P-201ENST00000448149 1036 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 HILS1-202ENST00000545329 423 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 MIR6775-201ENST00000617557 69 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 MGST3-204ENST00000367888 778 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PUDPP3-201ENST00000445368 636 ntBASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AC022447.6-201ENST00000515522 438 ntBASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AP005482.1-201ENST00000563722 1273 ntBASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AC239800.4-201ENST00000603712 296 ntBASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AC067750.1-201ENST00000608826 6545 ntBASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB13Q9Y5F0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms