Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CAB39P1-201ENST00000502277 460 ntBASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 MTND2P31-201ENST00000512602 616 ntBASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AC079414.2-201ENST00000567157 1104 ntBASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 MTATP6P25-201ENST00000574491 261 ntBASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 RN7SL713P-201ENST00000582127 302 ntBASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AC139749.1-202ENST00000617529 3139 ntBASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS9D1Q9Y2B5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AC006001.1-201ENST00000325130 474 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 BOLA2P3-201ENST00000404566 256 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 MTND1P31-201ENST00000449206 961 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 COX20P2-201ENST00000452636 358 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AL590640.2-201ENST00000457038 527 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AL022319.1-201ENST00000458183 1167 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 COX5BP1-201ENST00000507622 393 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 SORD2P-201ENST00000558556 1069 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 ZACNP1-201ENST00000612259 710 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 IGHV3-72-202ENST00000621503 303 ntBASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS9D1Q9Y2B5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VPS9D1Q9Y2B5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms