Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX6Q9UPM6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX6Q9UPM6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LHX6Q9UPM6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX6Q9UPM6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX6Q9UPM6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.08□□□□□ -0.15
LHX6Q9UPM6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC004554.1-201ENST00000422830 1468 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC004522.1-201ENST00000419978 654 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 MTCO2P17-201ENST00000424336 677 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC092447.3-201ENST00000426027 686 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 KRT17P4-201ENST00000429445 819 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AL009172.1-201ENST00000436365 1098 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 RNFT1P2-201ENST00000443064 757 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC008723.1-201ENST00000506922 207 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC009879.1-201ENST00000520029 839 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC005324.6-201ENST00000587972 613 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC021016.3-201ENST00000608367 477 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC010503.4-201ENST00000615487 688 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 AC148477.4-201ENST00000613430 1793 ntBASIC14.08□□□□□ -0.16
LHX6Q9UPM6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX6Q9UPM6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 AL513523.2-202ENST00000427283 2040 ntBASIC14.07□□□□□ -0.16
LHX6Q9UPM6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LHX6Q9UPM6 AL136309.1-201ENST00000403917 691 ntBASIC14.07□□□□□ -0.16
LHX6Q9UPM6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms