Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 BTBD6P1-201ENST00000412176 1267 ntBASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 FAM58BP-201ENST00000439056 645 ntBASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AL358472.3-201ENST00000608147 415 ntBASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC027601.3-201ENST00000622907 509 ntBASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PARPBPQ9NWS1 AL023775.1-201ENST00000454907 1746 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 REXO1L1P-201ENST00000379010 6598 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 INTS4P1-203ENST00000641008 3683 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AC232323.1-201ENST00000540724 2099 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 MIR4741-201ENST00000579822 90 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms