Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AL391280.1-201ENST00000506969 1062 ntBASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC104989.1-201ENST00000519711 778 ntBASIC15.09■□□□□ 0.01
PCDH9Q9HC56 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 SNX29P1-201ENST00000548357 1007 ntBASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC106820.3-201ENST00000561653 397 ntBASIC15.09■□□□□ 0.01
PCDH9Q9HC56 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PCDH9Q9HC56 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH9Q9HC56 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH9Q9HC56 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
PCDH9Q9HC56 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
PCDH9Q9HC56 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
PCDH9Q9HC56 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.08■□□□□ 0
PCDH9Q9HC56 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDH9Q9HC56 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PCDH9Q9HC56 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 ANKRD19P-201ENST00000338192 862 ntBASIC15.08■□□□□ 0
PCDH9Q9HC56 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 RN7SKP175-201ENST00000408472 289 ntBASIC15.08■□□□□ 0
PCDH9Q9HC56 MIR1202-201ENST00000408529 83 ntBASIC15.08■□□□□ 0
PCDH9Q9HC56 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.08■□□□□ 0
PCDH9Q9HC56 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.08■□□□□ 0
PCDH9Q9HC56 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.08■□□□□ 0
PCDH9Q9HC56 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.08■□□□□ 0
PCDH9Q9HC56 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDH9Q9HC56 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.08■□□□□ 0
PCDH9Q9HC56 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.08■□□□□ 0
PCDH9Q9HC56 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 OR10B1P-201ENST00000601666 907 ntBASIC15.08■□□□□ 0
PCDH9Q9HC56 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.08■□□□□ 0
PCDH9Q9HC56 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.08■□□□□ 0
PCDH9Q9HC56 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDH9Q9HC56 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH9Q9HC56 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.07■□□□□ 0
PCDH9Q9HC56 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.07■□□□□ 0
PCDH9Q9HC56 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH9Q9HC56 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms