Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 MIR566-201ENST00000385187 94 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AC244197.1-201ENST00000456494 951 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AC106047.2-201ENST00000511723 743 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AC013553.1-201ENST00000560906 267 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AC010632.2-201ENST00000588369 1224 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AP005264.6-204ENST00000588436 719 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AP005264.5-201ENST00000590066 467 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AP003392.6-201ENST00000607709 325 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 AC010976.2-201ENST00000609697 852 ntBASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.4■□□□□ 0.38
RTFDC1Q9BY42 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTFDC1Q9BY42 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTFDC1Q9BY42 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.39■□□□□ 0.38
RTFDC1Q9BY42 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 TREHP1-201ENST00000531328 465 ntBASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 AP005212.2-201ENST00000584979 510 ntBASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 EIF5AP2-201ENST00000585668 1047 ntBASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ODCP-201ENST00000459650 1639 ntBASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RTFDC1Q9BY42 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 MYADML-201ENST00000474610 2147 ntBASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms