Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 PDPK2P-202ENST00000562415 1191 ntBASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AC092364.2-202ENST00000597012 1073 ntBASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AC024075.2-201ENST00000598112 1473 ntBASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SEC22CQ9BRL7 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 KRT8P35-201ENST00000483942 1338 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AC015688.4-201ENST00000580780 1647 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AC243562.1-201ENST00000560672 389 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AC034105.1-201ENST00000563488 319 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 LINC01225-203ENST00000563550 1244 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AL136172.1-201ENST00000598590 1394 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AL445250.1-201ENST00000641671 2259 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 Z97205.2-201ENST00000564697 1639 ntBASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.37□□□□□ -0.43
SEC22CQ9BRL7 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms