Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AC097065.1-201ENST00000425737 517 ntBASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 RPL13AP19-201ENST00000434320 584 ntBASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AP005264.5-201ENST00000590066 467 ntBASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AL596257.1-201ENST00000641463 2694 ntBASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP2Q96SN8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 RN7SL357P-201ENST00000581065 298 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AL031673.1-201ENST00000611460 466 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC016397.2-201ENST00000624848 1985 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC007952.5-201ENST00000572818 1486 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 ODCP-201ENST00000459650 1639 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC073210.1-201ENST00000414799 232 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC091769.1-201ENST00000619576 568 ntBASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP2Q96SN8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CDK5RAP2Q96SN8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP2Q96SN8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.71■□□□□ 0.26
CDK5RAP2Q96SN8 AC004554.1-201ENST00000422830 1468 ntBASIC16.71■□□□□ 0.26
CDK5RAP2Q96SN8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP2Q96SN8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP2Q96SN8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 AC152010.1-201ENST00000415779 2006 ntBASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 PGAM1P12-201ENST00000505622 748 ntBASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms