Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC004899.2-201ENST00000622993 3860 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CNN2P2-201ENST00000443536 909 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 CNN2P3-201ENST00000450201 906 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC131206.1-201ENST00000538078 1211 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC093813.1-201ENST00000605066 256 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 GPALPP1-207ENST00000611650 899 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC006538.3-201ENST00000612495 578 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AL136317.3-201ENST00000618497 906 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 BX539320.1-201ENST00000623759 877 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CSPG4P11-201ENST00000560634 4910 ntBASIC11.89□□□□□ -0.51
RAB40CQ96S21 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB40CQ96S21 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 KRT18P28-201ENST00000453838 1332 ntBASIC11.88□□□□□ -0.51
RAB40CQ96S21 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 MEIS3P1-201ENST00000495167 958 ntBASIC11.88□□□□□ -0.51
RAB40CQ96S21 AC026434.2-201ENST00000506094 1078 ntBASIC11.88□□□□□ -0.51
RAB40CQ96S21 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.88□□□□□ -0.51
RAB40CQ96S21 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RAB40CQ96S21 Z92544.3-201ENST00000624747 417 ntBASIC11.88□□□□□ -0.51
RAB40CQ96S21 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms