Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.04■□□□□ -0
RPRD1AQ96P16 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.04■□□□□ -0
RPRD1AQ96P16 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.04■□□□□ -0
RPRD1AQ96P16 SCARNA20.5-201ENST00000516991 142 ntBASIC15.04■□□□□ -0
RPRD1AQ96P16 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.04■□□□□ -0
RPRD1AQ96P16 SORD2P-201ENST00000558556 1069 ntBASIC15.04■□□□□ -0
RPRD1AQ96P16 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.04■□□□□ -0
RPRD1AQ96P16 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.04■□□□□ -0
RPRD1AQ96P16 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.04■□□□□ -0
RPRD1AQ96P16 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 AC139749.1-202ENST00000617529 3139 ntBASIC15.04■□□□□ -0
RPRD1AQ96P16 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.04■□□□□ -0
RPRD1AQ96P16 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
RPRD1AQ96P16 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.04■□□□□ -0
RPRD1AQ96P16 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPRD1AQ96P16 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 CYP4F23P-201ENST00000593402 1579 ntBASIC15.03■□□□□ -0
RPRD1AQ96P16 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 AC138028.6-201ENST00000616106 1482 ntBASIC15.03■□□□□ -0
RPRD1AQ96P16 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RPRD1AQ96P16 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.03■□□□□ -0
RPRD1AQ96P16 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.03■□□□□ -0
RPRD1AQ96P16 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.03■□□□□ -0
RPRD1AQ96P16 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.03■□□□□ -0
RPRD1AQ96P16 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.03■□□□□ -0
RPRD1AQ96P16 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.03■□□□□ -0
RPRD1AQ96P16 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
RPRD1AQ96P16 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPRD1AQ96P16 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.03■□□□□ -0
RPRD1AQ96P16 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.02■□□□□ -0
RPRD1AQ96P16 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RPRD1AQ96P16 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPRD1AQ96P16 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.02■□□□□ -0
RPRD1AQ96P16 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RPRD1AQ96P16 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPRD1AQ96P16 FNTAP2-201ENST00000430308 634 ntBASIC15.02■□□□□ -0
RPRD1AQ96P16 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.02■□□□□ -0
RPRD1AQ96P16 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 AKR7A2P1-201ENST00000460134 915 ntBASIC15.02■□□□□ -0
RPRD1AQ96P16 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.02■□□□□ -0
RPRD1AQ96P16 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 SNORD3B-2-202ENST00000571722 791 ntBASIC15.02■□□□□ -0
RPRD1AQ96P16 AC103810.3-201ENST00000583567 96 ntBASIC15.02■□□□□ -0
RPRD1AQ96P16 MIR6074-201ENST00000612054 107 ntBASIC15.02■□□□□ -0
RPRD1AQ96P16 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.02■□□□□ -0
RPRD1AQ96P16 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPRD1AQ96P16 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPRD1AQ96P16 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms