Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 C8orf49-201ENST00000525043 1968 ntBASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 RN7SKP214-201ENST00000364208 315 ntBASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 AL645939.5-201ENST00000606834 243 ntBASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 AC091544.8-201ENST00000619490 361 ntBASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 NAP1L6-202ENST00000641404 1222 ntBASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 AC136759.1-202ENST00000530858 2194 ntBASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC022447.6-201ENST00000515522 438 ntBASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC005586.2-201ENST00000563946 837 ntBASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AL157791.1-201ENST00000553667 1699 ntBASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.3□□□□□ -0.6
UBE2E2Q96LR5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms