Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 PIN4P1-201ENST00000451079 396 ntBASIC17.08■□□□□ 0.32
TRIM47Q96LD4 AL157792.1-201ENST00000488281 530 ntBASIC17.08■□□□□ 0.32
TRIM47Q96LD4 AC008723.1-201ENST00000506922 207 ntBASIC17.08■□□□□ 0.32
TRIM47Q96LD4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 RPL17P45-201ENST00000586289 509 ntBASIC17.08■□□□□ 0.32
TRIM47Q96LD4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM47Q96LD4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 LINC00552-201ENST00000625151 2579 ntBASIC17.07■□□□□ 0.32
TRIM47Q96LD4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 AL360270.3-201ENST00000609118 1348 ntBASIC17.07■□□□□ 0.32
TRIM47Q96LD4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 AC012362.1-201ENST00000434906 739 ntBASIC17.07■□□□□ 0.32
TRIM47Q96LD4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 REXO1L2P-201ENST00000425429 2069 ntBASIC17.07■□□□□ 0.32
TRIM47Q96LD4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM47Q96LD4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AL592076.1-201ENST00000424448 303 ntBASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 AL157813.1-201ENST00000612996 587 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms