Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SNX27Q96L92 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.67■□□□□ 0.1
SNX27Q96L92 AL353637.1-201ENST00000451571 732 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.67■□□□□ 0.1
SNX27Q96L92 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.67■□□□□ 0.1
SNX27Q96L92 DNM1P51-201ENST00000558149 522 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 NPM1P43-201ENST00000558669 786 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.67■□□□□ 0.1
SNX27Q96L92 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 AP001267.2-201ENST00000532619 2086 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 AC140479.7-201ENST00000636301 2332 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 FRMPD2B-201ENST00000431305 1347 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 AC064801.2-201ENST00000625052 1303 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 RNA5SP359-201ENST00000364838 113 ntBASIC15.66■□□□□ 0.1
SNX27Q96L92 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.66■□□□□ 0.1
SNX27Q96L92 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 CTBP2P4-201ENST00000513884 920 ntBASIC15.66■□□□□ 0.1
SNX27Q96L92 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 AC242376.1-201ENST00000559033 726 ntBASIC15.66■□□□□ 0.1
SNX27Q96L92 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.66■□□□□ 0.1
SNX27Q96L92 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.66■□□□□ 0.1
SNX27Q96L92 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SNX27Q96L92 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SNX27Q96L92 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 AC104506.1-201ENST00000609247 429 ntBASIC15.66■□□□□ 0.1
SNX27Q96L92 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX27Q96L92 AP002353.1-201ENST00000528257 1599 ntBASIC15.66■□□□□ 0.1
SNX27Q96L92 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX27Q96L92 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX27Q96L92 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX27Q96L92 NFIC-211ENST00000641145 8399 ntBASIC15.65■□□□□ 0.1
SNX27Q96L92 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX27Q96L92 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms