Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 DLX4-206ENST00000611342 1662 ntBASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 CETN4P-206ENST00000642099 2168 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 TOMM22P5-201ENST00000416399 439 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AC136604.1-202ENST00000425471 771 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AC027612.4-201ENST00000605371 583 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AP001059.3-201ENST00000619053 235 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AL731571.1-201ENST00000617058 5428 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 AC024075.2-201ENST00000598112 1473 ntBASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP6Q96FZ7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 AC125807.2-201ENST00000513358 3514 ntBASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TUBB8P4-201ENST00000511806 1324 ntBASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms