Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 CYP46A4P-201ENST00000414953 267 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 AC011742.3-201ENST00000439053 820 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 SPTLC1P5-201ENST00000450718 252 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 AC005586.2-201ENST00000563946 837 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 MIR6074-201ENST00000612054 107 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 AL139099.5-201ENST00000635274 300 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 AL805961.1-203ENST00000641078 1258 ntBASIC14.45□□□□□ -0.1
SCAMP4Q969E2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SCAMP4Q969E2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 RN7SKP214-201ENST00000364208 315 ntBASIC14.44□□□□□ -0.1
SCAMP4Q969E2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 OR2R1P-201ENST00000441404 914 ntBASIC14.44□□□□□ -0.1
SCAMP4Q969E2 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 PGAM1P5-201ENST00000548011 764 ntBASIC14.44□□□□□ -0.1
SCAMP4Q969E2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 RN7SL774P-201ENST00000577467 290 ntBASIC14.44□□□□□ -0.1
SCAMP4Q969E2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAMP4Q969E2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms