Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.49■□□□□ 0.07
SHC3Q92529 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.49■□□□□ 0.07
SHC3Q92529 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.49■□□□□ 0.07
SHC3Q92529 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SHC3Q92529 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.49■□□□□ 0.07
SHC3Q92529 FAM21FP-201ENST00000426241 1131 ntBASIC15.49■□□□□ 0.07
SHC3Q92529 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.49■□□□□ 0.07
SHC3Q92529 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.49■□□□□ 0.07
SHC3Q92529 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SHC3Q92529 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.49■□□□□ 0.07
SHC3Q92529 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.49■□□□□ 0.07
SHC3Q92529 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.49■□□□□ 0.07
SHC3Q92529 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.49■□□□□ 0.07
SHC3Q92529 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHC3Q92529 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 AC023794.5-201ENST00000564380 2157 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SHC3Q92529 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SHC3Q92529 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 KRT18P36-201ENST00000411618 1276 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.48■□□□□ 0.07
SHC3Q92529 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.48■□□□□ 0.07
SHC3Q92529 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 Z93015.1-201ENST00000451718 390 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 BNIP3P42-201ENST00000454982 569 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.48■□□□□ 0.07
SHC3Q92529 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SHC3Q92529 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.48■□□□□ 0.07
SHC3Q92529 AC005730.2-201ENST00000564549 1184 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 AC124068.2-201ENST00000569473 1109 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.48■□□□□ 0.07
SHC3Q92529 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 AC005324.6-201ENST00000587972 613 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 AC010328.2-201ENST00000597698 1111 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 BNIP3P29-201ENST00000598302 571 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 AC021016.3-201ENST00000608367 477 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 AC011447.5-201ENST00000616168 564 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 AC133540.1-201ENST00000620845 1019 ntBASIC15.48■□□□□ 0.07
SHC3Q92529 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SHC3Q92529 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.48■□□□□ 0.07
SHC3Q92529 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHC3Q92529 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SHC3Q92529 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms