Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
DDX1Q92499 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
DDX1Q92499 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.5■□□□□ 0.07
DDX1Q92499 FNTAP2-201ENST00000430308 634 ntBASIC15.5■□□□□ 0.07
DDX1Q92499 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 EIF4HP1-201ENST00000453115 687 ntBASIC15.5■□□□□ 0.07
DDX1Q92499 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.5■□□□□ 0.07
DDX1Q92499 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.5■□□□□ 0.07
DDX1Q92499 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.5■□□□□ 0.07
DDX1Q92499 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 AL359881.3-201ENST00000602640 1721 ntBASIC15.5■□□□□ 0.07
DDX1Q92499 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 AL008718.2-201ENST00000609206 1313 ntBASIC15.49■□□□□ 0.07
DDX1Q92499 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.49■□□□□ 0.07
DDX1Q92499 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 AL591846.1-201ENST00000451736 433 ntBASIC15.49■□□□□ 0.07
DDX1Q92499 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.49■□□□□ 0.07
DDX1Q92499 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.49■□□□□ 0.07
DDX1Q92499 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.49■□□□□ 0.07
DDX1Q92499 MIR6720-201ENST00000611664 98 ntBASIC15.49■□□□□ 0.07
DDX1Q92499 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.49■□□□□ 0.07
DDX1Q92499 AL353726.2-201ENST00000623259 884 ntBASIC15.49■□□□□ 0.07
DDX1Q92499 AC138627.1-207ENST00000641560 1006 ntBASIC15.49■□□□□ 0.07
DDX1Q92499 Z98259.2-201ENST00000641583 609 ntBASIC15.49■□□□□ 0.07
DDX1Q92499 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
DDX1Q92499 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.49■□□□□ 0.07
DDX1Q92499 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
DDX1Q92499 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DDX1Q92499 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.49■□□□□ 0.07
DDX1Q92499 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.48■□□□□ 0.07
DDX1Q92499 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.48■□□□□ 0.07
DDX1Q92499 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.48■□□□□ 0.07
DDX1Q92499 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
DDX1Q92499 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DDX1Q92499 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.48■□□□□ 0.07
DDX1Q92499 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
DDX1Q92499 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
DDX1Q92499 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.48■□□□□ 0.07
DDX1Q92499 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.48■□□□□ 0.07
DDX1Q92499 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.48■□□□□ 0.07
DDX1Q92499 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.48■□□□□ 0.07
DDX1Q92499 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.48■□□□□ 0.07
DDX1Q92499 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms