Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 FP325330.2-201ENST00000624219 5630 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AC012618.1-201ENST00000461223 412 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 RN7SL774P-201ENST00000577467 290 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AC009955.4-201ENST00000597192 544 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AC097724.1-201ENST00000609581 426 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AL136295.7-201ENST00000619226 1200 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AL805961.1-203ENST00000641078 1258 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 AC136759.1-202ENST00000530858 2194 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 MBLAC2-202ENST00000514906 1936 ntBASIC15.4■□□□□ 0.06
TTC16Q8NEE8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.39■□□□□ 0.05
TTC16Q8NEE8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 RNA5SP423-201ENST00000517127 109 ntBASIC15.39■□□□□ 0.05
TTC16Q8NEE8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 AL109954.1-202ENST00000564051 2148 ntBASIC15.39■□□□□ 0.05
TTC16Q8NEE8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC16Q8NEE8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms