Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC097359.2-201ENST00000604992 2389 ntBASIC22.09■■□□□ 1.13
CFAP43Q8NDM7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CFAP43Q8NDM7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CFAP43Q8NDM7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CFAP43Q8NDM7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 AC006987.1-201ENST00000413610 527 ntBASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 RN7SL788P-201ENST00000460504 316 ntBASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 AP005264.5-201ENST00000590066 467 ntBASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 HSPA8P5-201ENST00000456928 2069 ntBASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 LINC00552-201ENST00000625151 2579 ntBASIC22.08■■□□□ 1.13
CFAP43Q8NDM7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CFAP43Q8NDM7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 TYMSP2-201ENST00000589501 424 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 GOLGA8VP-201ENST00000559009 1798 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 AC068760.1-201ENST00000493579 1953 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 RNLS-203ENST00000437752 525 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 AC010900.1-201ENST00000449849 1296 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 BCL2L12P1-201ENST00000508390 733 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 CTBP2P6-201ENST00000526402 1229 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 AL512310.5-201ENST00000551999 515 ntBASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CFAP43Q8NDM7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 PSAT1P2-201ENST00000426107 972 ntBASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 AC087203.1-201ENST00000532111 1181 ntBASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC22.06■■□□□ 1.12
CFAP43Q8NDM7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms