Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AL139008.1-201ENST00000437894 228 ntBASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC084752.1-201ENST00000509766 622 ntBASIC17.91■□□□□ 0.46
SYNE4Q8N205 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC140658.4-201ENST00000561990 352 ntBASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 LINC00115-201ENST00000473798 1317 ntBASIC17.91■□□□□ 0.46
SYNE4Q8N205 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.91■□□□□ 0.46
SYNE4Q8N205 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNE4Q8N205 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AL512306.1-201ENST00000432698 848 ntBASIC17.9■□□□□ 0.46
SYNE4Q8N205 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AL021707.6-201ENST00000609212 491 ntBASIC17.9■□□□□ 0.46
SYNE4Q8N205 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AP001267.2-201ENST00000532619 2086 ntBASIC17.9■□□□□ 0.46
SYNE4Q8N205 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNE4Q8N205 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNE4Q8N205 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNE4Q8N205 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNE4Q8N205 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.89■□□□□ 0.46
SYNE4Q8N205 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNE4Q8N205 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.46
SYNE4Q8N205 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNE4Q8N205 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNE4Q8N205 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNE4Q8N205 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNE4Q8N205 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNE4Q8N205 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms