Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 AC011840.2-201ENST00000563063 1520 ntBASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC019193.1-201ENST00000506678 823 ntBASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AL132994.2-201ENST00000603120 687 ntBASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 AC138696.2-201ENST00000607376 223 ntBASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SBSPONQ8IVN8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SBSPONQ8IVN8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SBSPONQ8IVN8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SBSPONQ8IVN8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SBSPONQ8IVN8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SBSPONQ8IVN8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SBSPONQ8IVN8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 CES1P1-201ENST00000421606 1704 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 FGD5P1-202ENST00000614866 2498 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC010141.1-201ENST00000411585 623 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC073150.1-201ENST00000450406 1084 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC104784.1-201ENST00000473096 294 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC009779.1-201ENST00000551138 283 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC242376.1-201ENST00000559033 726 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC073352.2-201ENST00000609385 439 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AC103691.2-201ENST00000618824 433 ntBASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SBSPONQ8IVN8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms