Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AC026320.2-201ENST00000434379 478 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 RN7SL596P-201ENST00000582123 288 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AL109837.1-201ENST00000603272 613 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AC005632.3-201ENST00000605544 308 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AP003392.6-201ENST00000607709 325 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 AC002472.3-201ENST00000640124 621 ntBASIC15.52■□□□□ 0.08
RNF135Q8IUD6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF135Q8IUD6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 AL136379.1-201ENST00000623471 2642 ntBASIC15.52■□□□□ 0.07
RNF135Q8IUD6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RNF135Q8IUD6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 DNM1P51-201ENST00000558149 522 ntBASIC15.51■□□□□ 0.07
RNF135Q8IUD6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 MIR3677-201ENST00000578964 60 ntBASIC15.51■□□□□ 0.07
RNF135Q8IUD6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 ST20-AS1-201ENST00000560255 4223 ntBASIC15.51■□□□□ 0.07
RNF135Q8IUD6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF135Q8IUD6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 AP003398.1-201ENST00000531124 318 ntBASIC15.5■□□□□ 0.07
RNF135Q8IUD6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF135Q8IUD6 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms