Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 NDUFV2P1-201ENST00000596415 907 ntBASIC15.37■□□□□ 0.05
RNF43Q68DV7 AL358472.3-201ENST00000608147 415 ntBASIC15.37■□□□□ 0.05
RNF43Q68DV7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 AC018735.1-201ENST00000437208 1502 ntBASIC15.37■□□□□ 0.05
RNF43Q68DV7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 AC009093.2-202ENST00000620513 2079 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 KRT8P4-201ENST00000509735 1454 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 AC010141.1-201ENST00000411585 623 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 AL354877.1-201ENST00000424412 413 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 POM121L10P-201ENST00000436994 1285 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 MIR3619-201ENST00000579667 83 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 MIR4783-201ENST00000580343 82 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 SPCS2P2-201ENST00000603270 608 ntBASIC15.36■□□□□ 0.05
RNF43Q68DV7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF43Q68DV7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF43Q68DV7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 SBF1P1-201ENST00000444527 5631 ntBASIC15.35■□□□□ 0.05
RNF43Q68DV7 MIR600HG-201ENST00000449175 5984 ntBASIC15.35■□□□□ 0.05
RNF43Q68DV7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 AC100850.1-201ENST00000506768 649 ntBASIC15.35■□□□□ 0.05
RNF43Q68DV7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF43Q68DV7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 MIR4683-201ENST00000579659 81 ntBASIC15.35■□□□□ 0.05
RNF43Q68DV7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 MIR7845-201ENST00000618396 99 ntBASIC15.35■□□□□ 0.05
RNF43Q68DV7 AP001002.3-201ENST00000623482 206 ntBASIC15.35■□□□□ 0.05
RNF43Q68DV7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF43Q68DV7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms