Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 AP001527.2-201ENST00000614441 631 ntBASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 LINC00554-201ENST00000564841 3011 ntBASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 RNVU1-8-201ENST00000364272 125 ntBASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 COX20P1-201ENST00000366529 357 ntBASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 AC008026.2-201ENST00000495438 348 ntBASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 FAM86KP-201ENST00000509817 987 ntBASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 KRT8P2-201ENST00000556193 944 ntBASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD4Q5XG99 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC108734.2-201ENST00000420887 1069 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 GRPEL2P1-201ENST00000453145 339 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC244197.1-201ENST00000456494 951 ntBASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.12□□□□□ -0.15
LYSMD4Q5XG99 AC095040.1-201ENST00000513286 675 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms