Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 MIR4722-201ENST00000578292 60 ntBASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AC009955.4-201ENST00000597192 544 ntBASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AL805961.1-203ENST00000641078 1258 ntBASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AC068587.8-201ENST00000641239 219 ntBASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MPRIPP1-201ENST00000452433 1089 ntBASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AC012618.1-201ENST00000461223 412 ntBASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AC100827.2-201ENST00000563214 1194 ntBASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MIR3907-201ENST00000579424 151 ntBASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC144BQ3MJ40 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 TMEM198B-204ENST00000484016 896 ntBASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 MARK2P5-201ENST00000507649 634 ntBASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 AC079336.7-201ENST00000623428 1078 ntBASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC144BQ3MJ40 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms