Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDR1Q08345 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDR1Q08345 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDR1Q08345 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDR1Q08345 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDR1Q08345 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
DDR1Q08345 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 AC138035.3-201ENST00000622706 2791 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.76■□□□□ 0.43
DDR1Q08345 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 RPL3P2-204ENST00000413027 1203 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 KRT18P4-201ENST00000422599 1288 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 PSAT1P2-201ENST00000426107 972 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.76■□□□□ 0.43
DDR1Q08345 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.76■□□□□ 0.43
DDR1Q08345 ASS1P2-201ENST00000439895 1223 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 BRI3P1-201ENST00000440440 378 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 RPL3P5-201ENST00000441645 1232 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.76■□□□□ 0.43
DDR1Q08345 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 RN7SL455P-201ENST00000580629 282 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 FTLP5-201ENST00000586853 534 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.76■□□□□ 0.43
DDR1Q08345 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDR1Q08345 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 AC099063.4-201ENST00000641099 1602 ntBASIC17.76■□□□□ 0.43
DDR1Q08345 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.76■□□□□ 0.43
DDR1Q08345 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.75■□□□□ 0.43
DDR1Q08345 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 AC023141.7-201ENST00000430646 407 ntBASIC17.75■□□□□ 0.43
DDR1Q08345 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.75■□□□□ 0.43
DDR1Q08345 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.75■□□□□ 0.43
DDR1Q08345 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.75■□□□□ 0.43
DDR1Q08345 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 IGHEP2-201ENST00000519308 1256 ntBASIC17.75■□□□□ 0.43
DDR1Q08345 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.75■□□□□ 0.43
DDR1Q08345 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.75■□□□□ 0.43
DDR1Q08345 RN7SL556P-201ENST00000582856 298 ntBASIC17.75■□□□□ 0.43
DDR1Q08345 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.75■□□□□ 0.43
DDR1Q08345 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDR1Q08345 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
DDR1Q08345 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 AC138761.6-201ENST00000583997 1423 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DDR1Q08345 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDR1Q08345 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DDR1Q08345 PGAM1P11-201ENST00000416729 680 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 RN7SL147P-201ENST00000487345 298 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.74■□□□□ 0.43
DDR1Q08345 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 AC018846.1-201ENST00000568231 183 ntBASIC17.74■□□□□ 0.43
DDR1Q08345 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms