Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 GAPDHP65-201ENST00000425487 1006 ntBASIC13.29□□□□□ -0.28
CACNA1BQ00975 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 AC006449.6-201ENST00000612330 2296 ntBASIC13.29□□□□□ -0.28
CACNA1BQ00975 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 AC092364.2-201ENST00000596710 2692 ntBASIC13.29□□□□□ -0.28
CACNA1BQ00975 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 RN7SKP230-201ENST00000365642 335 ntBASIC13.29□□□□□ -0.28
CACNA1BQ00975 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 IQCF4-203ENST00000428561 420 ntBASIC13.29□□□□□ -0.28
CACNA1BQ00975 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 LILRP1-201ENST00000444199 1370 ntBASIC13.29□□□□□ -0.28
CACNA1BQ00975 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.29□□□□□ -0.28
CACNA1BQ00975 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 RN7SL480P-201ENST00000581481 294 ntBASIC13.28□□□□□ -0.28
CACNA1BQ00975 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 RN7SL202P-201ENST00000584410 262 ntBASIC13.28□□□□□ -0.28
CACNA1BQ00975 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.28□□□□□ -0.28
CACNA1BQ00975 AC073869.4-201ENST00000620841 800 ntBASIC13.28□□□□□ -0.28
CACNA1BQ00975 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 AC112504.1-201ENST00000623415 1841 ntBASIC13.28□□□□□ -0.28
CACNA1BQ00975 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CACNA1BQ00975 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CACNA1BQ00975 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms