Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL391069.4-201ENST00000609583 481 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 BAP1-211ENST00000615113 489 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 AL590560.3-201ENST00000623350 461 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CXCR4P61073 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 AL359845.1-201ENST00000458202 1648 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCR4P61073 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCR4P61073 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 AGAP12P-201ENST00000585227 2359 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CXCR4P61073 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.33□□□□□ -0.27
CXCR4P61073 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CXCR4P61073 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.33□□□□□ -0.27
CXCR4P61073 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CXCR4P61073 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 TREML5P-201ENST00000421694 576 ntBASIC13.33□□□□□ -0.28
CXCR4P61073 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.33□□□□□ -0.28
CXCR4P61073 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.33□□□□□ -0.28
CXCR4P61073 AC015911.4-201ENST00000588022 1070 ntBASIC13.33□□□□□ -0.28
CXCR4P61073 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.33□□□□□ -0.28
CXCR4P61073 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.33□□□□□ -0.28
CXCR4P61073 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 BTBD7P1-201ENST00000447253 1453 ntBASIC13.33□□□□□ -0.28
CXCR4P61073 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.33□□□□□ -0.28
CXCR4P61073 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.33□□□□□ -0.28
CXCR4P61073 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCR4P61073 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.32□□□□□ -0.28
CXCR4P61073 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 AC010970.1-201ENST00000445125 1848 ntBASIC13.32□□□□□ -0.28
CXCR4P61073 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.32□□□□□ -0.28
CXCR4P61073 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 AC139712.1-201ENST00000378256 1875 ntBASIC13.32□□□□□ -0.28
CXCR4P61073 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.32□□□□□ -0.28
CXCR4P61073 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CXCR4P61073 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.32□□□□□ -0.28
CXCR4P61073 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.32□□□□□ -0.28
CXCR4P61073 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms