Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SPCS3P61009 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 SALL4P5-201ENST00000419001 1760 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.98□□□□□ -0.49
SPCS3P61009 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
SPCS3P61009 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 AC007969.1-201ENST00000433675 447 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.98□□□□□ -0.49
SPCS3P61009 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 VDAC1P7-201ENST00000462417 847 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 TMEM198B-204ENST00000484016 896 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.98□□□□□ -0.49
SPCS3P61009 AC097493.3-201ENST00000509725 367 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.98□□□□□ -0.49
SPCS3P61009 SRD5A3P1-201ENST00000603021 949 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SPCS3P61009 AC134684.3-201ENST00000641758 218 ntBASIC11.98□□□□□ -0.49
SPCS3P61009 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SPCS3P61009 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS3P61009 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS3P61009 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SPCS3P61009 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS3P61009 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SPCS3P61009 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.97□□□□□ -0.49
SPCS3P61009 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS3P61009 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 HERC2P10-201ENST00000570209 2393 ntBASIC11.97□□□□□ -0.49
SPCS3P61009 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 AL136172.1-201ENST00000598590 1394 ntBASIC11.97□□□□□ -0.49
SPCS3P61009 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.97□□□□□ -0.49
SPCS3P61009 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SPCS3P61009 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS3P61009 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.97□□□□□ -0.49
SPCS3P61009 AC241585.1-201ENST00000433527 519 ntBASIC11.97□□□□□ -0.49
SPCS3P61009 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS3P61009 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS3P61009 AC009477.1-201ENST00000452936 217 ntBASIC11.97□□□□□ -0.49
SPCS3P61009 AC004967.1-201ENST00000453589 447 ntBASIC11.97□□□□□ -0.49
SPCS3P61009 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.97□□□□□ -0.49
SPCS3P61009 RN7SL399P-201ENST00000471648 279 ntBASIC11.97□□□□□ -0.49
SPCS3P61009 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms