Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.58□□□□□ -0.4
AP3S2P59780 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 AP000437.1-201ENST00000624057 2085 ntBASIC12.58□□□□□ -0.4
AP3S2P59780 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.58□□□□□ -0.4
AP3S2P59780 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.58□□□□□ -0.4
AP3S2P59780 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.58□□□□□ -0.4
AP3S2P59780 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.58□□□□□ -0.4
AP3S2P59780 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.57□□□□□ -0.4
AP3S2P59780 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 SALL4P5-201ENST00000419001 1760 ntBASIC12.57□□□□□ -0.4
AP3S2P59780 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 YBX2P1-201ENST00000394192 760 ntBASIC12.57□□□□□ -0.4
AP3S2P59780 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.57□□□□□ -0.4
AP3S2P59780 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.57□□□□□ -0.4
AP3S2P59780 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S2P59780 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S2P59780 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.57□□□□□ -0.4
AP3S2P59780 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 RN7SL828P-201ENST00000607615 303 ntBASIC12.57□□□□□ -0.4
AP3S2P59780 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
AP3S2P59780 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.57□□□□□ -0.4
AP3S2P59780 MRPL37P1-201ENST00000592451 1337 ntBASIC12.57□□□□□ -0.4
AP3S2P59780 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.57□□□□□ -0.4
AP3S2P59780 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP3S2P59780 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S2P59780 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 AL158070.2-201ENST00000623713 1621 ntBASIC12.56□□□□□ -0.4
AP3S2P59780 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
AP3S2P59780 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 AC007969.1-201ENST00000433675 447 ntBASIC12.56□□□□□ -0.4
AP3S2P59780 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.56□□□□□ -0.4
AP3S2P59780 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.56□□□□□ -0.4
AP3S2P59780 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.56□□□□□ -0.4
AP3S2P59780 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
AP3S2P59780 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.56□□□□□ -0.4
AP3S2P59780 AL133215.2-201ENST00000609242 977 ntBASIC12.56□□□□□ -0.4
AP3S2P59780 AL513190.1-201ENST00000621254 727 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms