Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
FOXG1P55316 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 AL161932.2-201ENST00000435436 679 ntBASIC12.75□□□□□ -0.37
FOXG1P55316 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.75□□□□□ -0.37
FOXG1P55316 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 PGAM1P5-201ENST00000548011 764 ntBASIC12.75□□□□□ -0.37
FOXG1P55316 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.75□□□□□ -0.37
FOXG1P55316 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.75□□□□□ -0.37
FOXG1P55316 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 NDUFV2P1-201ENST00000596415 907 ntBASIC12.75□□□□□ -0.37
FOXG1P55316 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
FOXG1P55316 AL805961.1-203ENST00000641078 1258 ntBASIC12.75□□□□□ -0.37
FOXG1P55316 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.75□□□□□ -0.37
FOXG1P55316 AC026748.1-201ENST00000624349 3251 ntBASIC12.75□□□□□ -0.37
FOXG1P55316 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
FOXG1P55316 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
FOXG1P55316 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 AL009178.2-201ENST00000597278 2719 ntBASIC12.74□□□□□ -0.37
FOXG1P55316 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.74□□□□□ -0.37
FOXG1P55316 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.74□□□□□ -0.37
FOXG1P55316 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.74□□□□□ -0.37
FOXG1P55316 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.74□□□□□ -0.37
FOXG1P55316 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.74□□□□□ -0.37
FOXG1P55316 AC005586.2-201ENST00000563946 837 ntBASIC12.74□□□□□ -0.37
FOXG1P55316 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.74□□□□□ -0.37
FOXG1P55316 AC124068.2-201ENST00000569473 1109 ntBASIC12.74□□□□□ -0.37
FOXG1P55316 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.74□□□□□ -0.37
FOXG1P55316 MIR6074-201ENST00000612054 107 ntBASIC12.74□□□□□ -0.37
FOXG1P55316 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 HSPA8P5-201ENST00000456928 2069 ntBASIC12.74□□□□□ -0.37
FOXG1P55316 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXG1P55316 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
FOXG1P55316 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXG1P55316 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXG1P55316 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms